Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Late competence protein | EDC56_1287 | Not Available | Positive | 1458619 - 1459770 | 41602.6 |
| n-6 dna methylase | EDC56_1288 | Not Available | Positive | 1460160 - 1461419 | 46812.7 |
| hypothetical protein | EDC56_1289 | Not Available | Negative | 1461432 - 1462076 | 24749.6 |
| Hypothetical protein | EDC56_1290 | Not Available | Negative | 1462073 - 1463188 | 42790.9 |
| Putative integrase | EDC56_1291 | Not Available | Negative | 1463338 - 1464582 | 47119.9 |
| Attr | Not Available | Not Available | Positive | 1464762 - 1464784 | Not Available |
| stringent starvation protein b | EDC56_0001 | Not Available | Negative | 170 - 559 | 14399.3 |
| rna polymerase-associated protein | EDC56_0002 | Not Available | Negative | 592 - 1239 | 24913.3 |
| ubiquinol-cytochrome c reductase cytochrome c1 subunit | EDC56_0003 | Not Available | Negative | 1329 - 2120 | 29604.9 |
| ubiquinol-cytochrome c reductase cytochrome b subunit | EDC56_0004 | Not Available | Negative | 2117 - 3361 | 46879.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
