Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail protein | EDC56_1259 | Not Available | Negative | 1439019 - 1439357 | 12382.9 |
| Putative baseplate assembly protein v | EDC56_1260 | Not Available | Negative | 1439430 - 1439957 | 18674.3 |
| hypothetical protein | EDC56_1261 | Not Available | Negative | 1439954 - 1440499 | 20248.7 |
| hypothetical protein | EDC56_1262 | Not Available | Negative | 1440496 - 1441092 | 21843.2 |
| hypothetical protein | EDC56_1263 | Not Available | Negative | 1441092 - 1441406 | 11657.2 |
| Major capsid protein | EDC56_1264 | Not Available | Negative | 1441670 - 1443673 | 71936.2 |
| Putative portal protein | EDC56_1265 | Not Available | Negative | 1443735 - 1445159 | 51488.6 |
| Hypothetical protein | EDC56_1266 | Not Available | Negative | 1445261 - 1445509 | 9226.26 |
| Putative large terminase subunit | EDC56_1267 | Not Available | Negative | 1445518 - 1447557 | 76896.2 |
| Putative small terminase subunit | EDC56_1268 | Not Available | Negative | 1447628 - 1448140 | 19047.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
