Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system permease protein | EDC56_0917 | Not Available | Negative | 1048866 - 1051370 | 91622.8 |
| putative abc transport system atp-binding protein | EDC56_0918 | Not Available | Negative | 1051363 - 1052055 | 24841.5 |
| acyl-coa thioesterase-1 | EDC56_0919 | Not Available | Positive | 1052152 - 1052781 | 23197.1 |
| ribosomal protein s18 acetylase rimi-like enzyme | EDC56_0920 | Not Available | Positive | 1053068 - 1053514 | 16607.7 |
| hypothetical protein | EDC56_0921 | Not Available | Positive | 1053791 - 1054114 | 12342.2 |
| deazaflavin-dependent oxidoreductase (nitroreductase family) | EDC56_0922 | Not Available | Positive | 1054419 - 1054919 | 19116.4 |
| threonine/homoserine/homoserine lactone efflux protein | EDC56_0923 | Not Available | Positive | 1055314 - 1055907 | 22020.4 |
| hypothetical protein | EDC56_0924 | Not Available | Positive | 1056293 - 1057120 | 29304.8 |
| lysr family transcriptional regulator | EDC56_0925 | Not Available | Negative | 1057245 - 1058189 | 34779.7 |
| phzf family phenazine biosynthesis protein | EDC56_0926 | Not Available | Positive | 1058273 - 1059178 | 32486.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
