Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative effector of murein hydrolase | EDC56_0907 | Not Available | Negative | 1042324 - 1043016 | 24288.8 |
| holin-like protein | EDC56_0908 | Not Available | Negative | 1043016 - 1043414 | 14300.2 |
| lysr family transcriptional regulator | EDC56_0909 | Not Available | Positive | 1043521 - 1044405 | 32184.4 |
| hypothetical protein | EDC56_0910 | Not Available | Positive | 1044551 - 1045000 | 17157.3 |
| hypothetical protein | EDC56_0911 | Not Available | Positive | 1044997 - 1045215 | 7961.58 |
| nickel superoxide dismutase | EDC56_0912 | Not Available | Positive | 1045219 - 1045719 | 18698.4 |
| nickel-type superoxide dismutase maturation protease | EDC56_0913 | Not Available | Positive | 1045716 - 1046033 | 11450.2 |
| hypothetical protein | EDC56_0914 | Not Available | Negative | 1045926 - 1046180 | 9099.9 |
| endonuclease/exonuclease/phosphatase family protein | EDC56_0915 | Not Available | Positive | 1046519 - 1047706 | 44319.1 |
| endonuclease/exonuclease/phosphatase family protein | EDC56_0916 | Not Available | Positive | 1047703 - 1048755 | 38621.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
