Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ethanolamine permease | EDC56_0897 | Not Available | Negative | 1029114 - 1030541 | 50000.1 |
| ethanolamine ammonia-lyase light chain | EDC56_0898 | Not Available | Negative | 1030647 - 1031465 | 29739.9 |
| ethanolamine ammonia-lyase heavy chain | EDC56_0899 | Not Available | Negative | 1031462 - 1032871 | 50814.6 |
| arac family ethanolamine operon transcriptional activator | EDC56_0900 | Not Available | Positive | 1033071 - 1034087 | 38508.6 |
| cysteine desulfurase | EDC56_0901 | Not Available | Positive | 1034185 - 1035324 | 40844.4 |
| l-histidine carboxy-lyase (histamine-forming) | EDC56_0902 | Not Available | Negative | 1035412 - 1036563 | 43312.5 |
| arginine:agmatine antiporter | EDC56_0903 | Not Available | Negative | 1036644 - 1037972 | 47678.4 |
| l-histidine carboxy-lyase (histamine-forming) | EDC56_0904 | Not Available | Negative | 1038494 - 1039642 | 42921.8 |
| arginine:agmatine antiporter | EDC56_0905 | Not Available | Negative | 1039723 - 1041051 | 47513.3 |
| mapeg family protein | EDC56_0906 | Not Available | Negative | 1041542 - 1042081 | 19281.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
