Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ampd protein | EDC56_0877 | Not Available | Negative | 1005678 - 1006262 | 21469.2 |
| uncharacterized protein duf1631 | EDC56_0878 | Not Available | Negative | 1006347 - 1008701 | 87368.7 |
| aspartyl protease family protein | EDC56_0879 | Not Available | Positive | 1009062 - 1009583 | 18835.5 |
| nicotinate-nucleotide pyrophosphorylase | EDC56_0880 | Not Available | Positive | 1009664 - 1010515 | 30424.2 |
| glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii) | EDC56_0881 | Not Available | Positive | 1010675 - 1011490 | 30828.2 |
| uracil permease | EDC56_0882 | Not Available | Negative | 1011495 - 1012736 | 42756.2 |
| hypothetical protein | EDC56_0883 | Not Available | Positive | 1013038 - 1013715 | 25742.9 |
| hypothetical protein | EDC56_0884 | Not Available | Positive | 1013842 - 1014195 | 12820.0 |
| voltage-gated sodium channel | EDC56_0885 | Not Available | Positive | 1014517 - 1015344 | 31443.9 |
| tetr family transcriptional regulator | EDC56_0886 | Not Available | Positive | 1015460 - 1016032 | 21499.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
