Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding padr family transcriptional regulator | EDC56_0847 | Not Available | Positive | 978411 - 979100 | 25942.7 |
| 5'-nucleotidase | EDC56_0848 | Not Available | Negative | 979025 - 980047 | 37215.9 |
| soluble lytic murein transglycosylase | EDC56_0849 | Not Available | Positive | 980387 - 982444 | 79332.1 |
| hypothetical protein | EDC56_0850 | Not Available | Positive | 982511 - 983869 | 49879.2 |
| uncharacterized protein (tigr00369 family) | EDC56_0851 | Not Available | Positive | 984021 - 984503 | 17263.6 |
| putative membrane protein | EDC56_0852 | Not Available | Positive | 984681 - 984959 | 9376.07 |
| hypothetical protein | EDC56_0853 | Not Available | Positive | 985072 - 986010 | 35458.1 |
| putative dna-binding protein | EDC56_0854 | Not Available | Positive | 985988 - 986884 | 34202.6 |
| rna polymerase sigma-70 factor (ecf subfamily) | EDC56_0855 | Not Available | Positive | 986887 - 987366 | 19043.2 |
| hypothetical protein | EDC56_0856 | Not Available | Positive | 987460 - 988083 | 23226.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
