Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate carboxylase type 1 | EDC56_0837 | Not Available | Negative | 962214 - 964838 | 97984.6 |
| lysr family hydrogen peroxide-inducible transcriptional activator | EDC56_0838 | Not Available | Negative | 965004 - 965903 | 33291.7 |
| peroxiredoxin (alkyl hydroperoxide reductase subunit c) | EDC56_0839 | Not Available | Positive | 966165 - 966734 | 20786.5 |
| putative secreted protein | EDC56_0840 | Not Available | Positive | 967156 - 967734 | 19917.1 |
| hypothetical protein | EDC56_0841 | Not Available | Negative | 967836 - 969359 | 57826.2 |
| outer membrane receptor protein involved in fe transport | EDC56_0842 | Not Available | Negative | 969356 - 971470 | 79229.8 |
| hypothetical protein | EDC56_0843 | Not Available | Negative | 971715 - 972161 | 15957.2 |
| para-nitrobenzyl esterase | EDC56_0844 | Not Available | Negative | 972357 - 974072 | 63656.2 |
| transferase family protein | EDC56_0845 | Not Available | Negative | 974210 - 975484 | 48083.6 |
| acyl-homoserine-lactone acylase | EDC56_0846 | Not Available | Negative | 975813 - 978284 | 89833.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
