Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acid stress-induced bola-like protein ibag/yrba | EDC56_0015 | Not Available | Negative | 12297 - 12539 | 8718.43 |
| phospholipid transport system substrate-binding protein | EDC56_0016 | Not Available | Negative | 12667 - 13359 | 26277.4 |
| arabinose-5-phosphate isomerase | EDC56_0017 | Not Available | Positive | 13571 - 14545 | 33638.8 |
| lps export abc transporter protein lptc | EDC56_0018 | Not Available | Positive | 14580 - 15152 | 20774.9 |
| lipopolysaccharide export system protein lpta | EDC56_0019 | Not Available | Positive | 15142 - 15729 | 21420.4 |
| lipopolysaccharide export system atp-binding protein | EDC56_0020 | Not Available | Positive | 15733 - 16458 | 26651.4 |
| rna polymerase rpon-/sigl-like sigma 54 subunit | EDC56_0021 | Not Available | Positive | 16716 - 18230 | 56611.0 |
| putative sigma-54 modulation protein | EDC56_0022 | Not Available | Positive | 18380 - 18682 | 11060.0 |
| phosphotransferase iia-like nitrogen-regulatory protein ptsn | EDC56_0023 | Not Available | Positive | 18704 - 19165 | 16989.2 |
| upf0042 nucleotide-binding protein | EDC56_0024 | Not Available | Positive | 19221 - 20075 | 32347.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
