Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold shock cspa family protein | EDC56_0787 | Not Available | Positive | 907456 - 907932 | 16906.6 |
| slyx protein | EDC56_0788 | Not Available | Negative | 907995 - 908243 | 9299.88 |
| cubico group peptidase (beta-lactamase class c family) | EDC56_0789 | Not Available | Negative | 908273 - 909409 | 40960.1 |
| glycerate dehydrogenase | EDC56_0790 | Not Available | Negative | 909419 - 910369 | 33416.4 |
| uncharacterized protein ybbk (duf523 family) | EDC56_0791 | Not Available | Positive | 910519 - 911019 | 18227.8 |
| translation initiation factor 1 (eif-1/sui1) | EDC56_0792 | Not Available | Positive | 911053 - 911403 | 12529.2 |
| cytochrome c oxidase cbb3-type subunit 1 | EDC56_0793 | Not Available | Positive | 911753 - 913171 | 53175.6 |
| cytochrome c oxidase cbb3-type subunit 2 | EDC56_0794 | Not Available | Positive | 913184 - 913792 | 23284.9 |
| cytochrome c oxidase cbb3-type subunit 4 | EDC56_0795 | Not Available | Positive | 913824 - 913973 | 5433.31 |
| cytochrome c oxidase cbb3-type subunit 3 | EDC56_0796 | Not Available | Positive | 914032 - 914916 | 32748.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
