Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system ompr family response regulator | EDC56_0777 | Not Available | Negative | 896239 - 896916 | 25075.3 |
| hypothetical protein | EDC56_0778 | Not Available | Positive | 897292 - 897906 | 23802.2 |
| putative rdd family membrane protein yckc | EDC56_0779 | Not Available | Positive | 897982 - 898467 | 18669.9 |
| lipopolysaccharide export system permease protein | EDC56_0780 | Not Available | Negative | 898464 - 899525 | 39575.0 |
| lipopolysaccharide export system permease protein | EDC56_0781 | Not Available | Negative | 899522 - 900601 | 39682.3 |
| leucyl aminopeptidase | EDC56_0782 | Not Available | Positive | 900925 - 902400 | 51238.4 |
| dna polymerase iii chi subunit | EDC56_0783 | Not Available | Positive | 902545 - 902970 | 16277.3 |
| hypothetical protein | EDC56_0784 | Not Available | Positive | 903034 - 903603 | 20465.6 |
| valyl-trna synthetase | EDC56_0785 | Not Available | Positive | 903808 - 906663 | 108557.0 |
| cspa family cold shock protein | EDC56_0786 | Not Available | Positive | 906763 - 906981 | 8090.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
