Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleoside-diphosphate reductase alpha chain | EDC56_0757 | Not Available | Negative | 871334 - 874153 | 105737.0 |
| homoserine/homoserine lactone efflux protein | EDC56_0758 | Not Available | Negative | 874798 - 875421 | 22621.2 |
| dna-binding transcriptional lysr family regulator | EDC56_0759 | Not Available | Positive | 875585 - 876499 | 33751.8 |
| hypothetical protein | EDC56_0760 | Not Available | Negative | 876591 - 877049 | 17254.2 |
| gntr family transcriptional regulator/mocr family aminotransferase | EDC56_0761 | Not Available | Negative | 877188 - 878639 | 53120.4 |
| nitroimidazol reductase nima-like fmn-containing flavoprotein (pyridoxamine 5'-phosphate oxidase superfamily) | EDC56_0762 | Not Available | Positive | 878736 - 879350 | 22901.4 |
| uncharacterized protein yjik | EDC56_0763 | Not Available | Negative | 879419 - 880312 | 33280.8 |
| peptide/nickel transport system permease protein | EDC56_0764 | Not Available | Negative | 880743 - 881675 | 34064.2 |
| peptide/nickel transport system permease protein | EDC56_0765 | Not Available | Negative | 881672 - 882652 | 36445.7 |
| peptide/nickel transport system substrate-binding protein | EDC56_0766 | Not Available | Negative | 882717 - 884270 | 57845.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
