Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonic anhydrase/acetyltransferase-like protein (isoleucine patch superfamily) | EDC56_0747 | Not Available | Negative | 863284 - 863811 | 18564.5 |
| uncharacterized protein duf3135 | EDC56_0748 | Not Available | Positive | 864224 - 864565 | 13327.1 |
| hypothetical protein | EDC56_0749 | Not Available | Negative | 864562 - 864873 | 11532.7 |
| pp_00728 | EDC56_0750 | Not Available | Negative | 864946 - 866154 | Not Available |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | EDC56_0751 | Not Available | Negative | 866213 - 867301 | 39963.4 |
| Trna-leu | Not Available | Not Available | Positive | 867536 - 867620 | Not Available |
| hypothetical protein | EDC56_0753 | Not Available | Negative | 867958 - 868311 | 13281.0 |
| uncharacterized protein duf2589 | EDC56_0754 | Not Available | Negative | 868392 - 868979 | 20762.6 |
| uncharacterized protein duf2589 | EDC56_0755 | Not Available | Negative | 869008 - 869568 | 21061.3 |
| ribonucleoside-diphosphate reductase beta chain | EDC56_0756 | Not Available | Negative | 870080 - 871240 | 44672.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
