Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol:disulfide interchange protein dsbc | EDC56_0737 | Not Available | Negative | 854842 - 855627 | 27736.7 |
| tyrosine recombinase xerd subunit | EDC56_0738 | Not Available | Negative | 855785 - 856690 | 34227.7 |
| lsu ribosomal protein l19p | EDC56_0739 | Not Available | Negative | 856775 - 857137 | 13657.7 |
| trna (guanine37-n(1)-) methyltransferase | EDC56_0740 | Not Available | Negative | 857280 - 858047 | 28315.7 |
| 16s rrna processing protein rimm | EDC56_0741 | Not Available | Negative | 858051 - 858596 | 20568.4 |
| small subunit ribosomal protein s16 | EDC56_0742 | Not Available | Negative | 858618 - 858872 | 9312.13 |
| signal recognition particle subunit ffh/srp54 (srp54) | EDC56_0743 | Not Available | Negative | 859130 - 860515 | 49978.5 |
| abc-type uncharacterized transport system permease subunit | EDC56_0744 | Not Available | Positive | 860857 - 861660 | 29198.8 |
| mg2+/co2+ transporter corb | EDC56_0745 | Not Available | Positive | 861784 - 863058 | 47591.8 |
| hypothetical protein | EDC56_0746 | Not Available | Negative | 863106 - 863291 | 6866.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
