Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rubredoxin | EDC56_0727 | Not Available | Negative | 843737 - 843904 | 6362.34 |
| type ii secretion system (t2ss) protein n | EDC56_0728 | Not Available | Negative | 844056 - 844844 | 28396.9 |
| pyridoxamine 5'-phosphate oxidase | EDC56_0729 | Not Available | Negative | 844934 - 845572 | 24526.2 |
| pimeloyl-acp methyl ester carboxylesterase | EDC56_0730 | Not Available | Negative | 845573 - 846424 | 31431.4 |
| lysyl-trna synthetase class ii | EDC56_0731 | Not Available | Negative | 846458 - 847945 | 56096.6 |
| peptide chain release factor 2 (brf-2) | EDC56_0732 | Not Available | Negative | 848046 - 849144 | 41024.7 |
| exonuclease recj | EDC56_0733 | Not Available | Negative | 849306 - 851045 | 62542.8 |
| polyketide cyclase/dehydrase/lipid transport protein | EDC56_0734 | Not Available | Negative | 851109 - 851708 | 22286.8 |
| threonine synthase | EDC56_0735 | Not Available | Negative | 851811 - 853205 | 51480.4 |
| homoserine dehydrogenase | EDC56_0736 | Not Available | Negative | 853293 - 854600 | 46067.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
