Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinol-cytochrome c reductase iron-sulfur subunit | EDC56_0005 | Not Available | Negative | 3361 - 3951 | 21060.1 |
| small subunit ribosomal protein s9 | EDC56_0006 | Not Available | Negative | 4170 - 4562 | 14631.8 |
| large subunit ribosomal protein l13 | EDC56_0007 | Not Available | Negative | 4562 - 5002 | 16363.8 |
| cell division protein zape | EDC56_0008 | Not Available | Negative | 5142 - 6242 | 41771.7 |
| hypothetical protein | EDC56_0009 | Not Available | Positive | 6447 - 6893 | 16475.4 |
| dinuclear metal center ybgi/sa1388 family protein | EDC56_0010 | Not Available | Negative | 6932 - 7690 | 27234.7 |
| serine protease degs | EDC56_0011 | Not Available | Positive | 7818 - 8927 | 39476.5 |
| histidinol dehydrogenase | EDC56_0012 | Not Available | Negative | 8948 - 10255 | 46395.3 |
| atp phosphoribosyltransferase | EDC56_0013 | Not Available | Negative | 10333 - 10971 | 22861.5 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | EDC56_0014 | Not Available | Negative | 10974 - 12236 | 44506.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
