Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease vii large subunit | EDC56_0717 | Not Available | Positive | 833508 - 834893 | 52014.8 |
| putative membrane protein sirb2 | EDC56_0718 | Not Available | Positive | 834936 - 835316 | 13518.5 |
| recombination associated protein rdgc | EDC56_0719 | Not Available | Positive | 835371 - 836270 | 33614.4 |
| two-component system sensor histidine kinase regb | EDC56_0720 | Not Available | Positive | 836360 - 837664 | 48787.2 |
| fis family two component transcriptional regulator | EDC56_0721 | Not Available | Positive | 837669 - 838202 | 19746.8 |
| rhomboid family protein | EDC56_0722 | Not Available | Positive | 838354 - 839772 | 54510.7 |
| hypothetical protein | EDC56_0723 | Not Available | Positive | 839803 - 841155 | 50861.1 |
| trk system potassium uptake protein trkh | EDC56_0724 | Not Available | Negative | 841209 - 842564 | 48976.6 |
| trk system potassium uptake protein trka | EDC56_0725 | Not Available | Negative | 842567 - 843220 | 23880.9 |
| duf3012 family protein | EDC56_0726 | Not Available | Positive | 843490 - 843657 | 6015.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
