Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase | EDC56_0707 | Not Available | Negative | 818551 - 819765 | 44734.5 |
| badm/rrf2 family transcriptional regulator | EDC56_0708 | Not Available | Negative | 819831 - 820328 | 18023.7 |
| trna (cytidine32/uridine32-2'-o)-methyltransferase | EDC56_0709 | Not Available | Negative | 820501 - 821268 | 28299.2 |
| myo-inositol-1(or 4)-monophosphatase | EDC56_0710 | Not Available | Positive | 821485 - 822285 | 29257.8 |
| protein translocase subunit secf | EDC56_0711 | Not Available | Negative | 822514 - 823440 | 33796.8 |
| preprotein translocase subunit secd | EDC56_0712 | Not Available | Negative | 823528 - 825384 | 67775.0 |
| phosphoribosylformylglycinamidine synthase | EDC56_0713 | Not Available | Negative | 825628 - 829524 | 139697.0 |
| trna(adenine34) deaminase | EDC56_0714 | Not Available | Negative | 829648 - 830184 | 19116.1 |
| gmp synthase (glutamine-hydrolysing) | EDC56_0715 | Not Available | Negative | 830250 - 831827 | 58109.8 |
| inosine-5'-monophosphate dehydrogenase | EDC56_0716 | Not Available | Negative | 831946 - 833424 | 51909.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
