Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytoskeleton protein rodz | EDC56_0697 | Not Available | Negative | 810512 - 811387 | 31194.4 |
| type iv pilus assembly protein pilf | EDC56_0698 | Not Available | Negative | 811368 - 812195 | 30986.9 |
| 23s rrna (adenine2503-c2)-methyltransferase | EDC56_0699 | Not Available | Negative | 812349 - 813527 | 43510.7 |
| nucleoside diphosphate kinase | EDC56_0700 | Not Available | Negative | 813746 - 814201 | 16418.7 |
| fes assembly protein iscx | EDC56_0701 | Not Available | Negative | 814447 - 814641 | 7367.59 |
| 2fe-2s ferredoxin | EDC56_0702 | Not Available | Negative | 814688 - 815026 | 12555.8 |
| chaperone protein hsca | EDC56_0703 | Not Available | Negative | 815033 - 816970 | 68566.6 |
| co-chaperone protein hscb | EDC56_0704 | Not Available | Negative | 817035 - 817574 | 20918.7 |
| iron-binding apoprotein isca | EDC56_0705 | Not Available | Negative | 817652 - 817975 | 11330.3 |
| nitrogen fixation nifu-like protein | EDC56_0706 | Not Available | Negative | 818053 - 818436 | 13449.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
