Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_0687 | Not Available | Negative | 797578 - 799389 | 64624.5 |
| duf3089 family protein | EDC56_0688 | Not Available | Negative | 799618 - 800709 | 40996.7 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | EDC56_0689 | Not Available | Negative | 801075 - 801797 | 25391.6 |
| dna-binding transcriptional lysr family regulator | EDC56_0690 | Not Available | Positive | 801939 - 802850 | 33836.7 |
| aldehyde dehydrogenase | EDC56_0691 | Not Available | Negative | 802863 - 804359 | 54258.5 |
| gtp-binding protein | EDC56_0692 | Not Available | Negative | 804530 - 805978 | 53688.5 |
| beta-barrel assembly machine subunit bamb | EDC56_0693 | Not Available | Negative | 806094 - 807245 | 41443.3 |
| putative negative regulator of rcsb-dependent stress response | EDC56_0694 | Not Available | Negative | 807249 - 807914 | 24427.4 |
| histidyl-trna synthetase | EDC56_0695 | Not Available | Negative | 808015 - 809295 | 47310.6 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | EDC56_0696 | Not Available | Negative | 809400 - 810512 | 40314.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
