Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase subunit a | EDC56_0667 | Not Available | Negative | 762313 - 764937 | 96672.9 |
| 5-methylthioadenosine/s-adenosylhomocysteine deaminase | EDC56_0668 | Not Available | Positive | 765345 - 766679 | 48810.9 |
| 3-demethylubiquinone-9 3-methyltransferase | EDC56_0669 | Not Available | Positive | 766669 - 767385 | 26490.8 |
| phosphoglycolate phosphatase | EDC56_0670 | Not Available | Positive | 767398 - 768117 | 26576.0 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | EDC56_0671 | Not Available | Positive | 768147 - 768905 | 27276.5 |
| putative secreted protein | EDC56_0672 | Not Available | Positive | 769173 - 769865 | 24173.9 |
| carbohydrate binding protein | EDC56_0673 | Not Available | Negative | 769980 - 771383 | 51652.4 |
| concanavalin a-like lectin/glucanase superfamily protein | EDC56_0674 | Not Available | Negative | 771450 - 774263 | 102683.0 |
| hypothetical protein | EDC56_0675 | Not Available | Negative | 774398 - 778429 | 151555.0 |
| hypothetical protein | EDC56_0676 | Not Available | Negative | 778426 - 780885 | 93118.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
