Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide biosynthesis regulator ycim | EDC56_0657 | Not Available | Negative | 751483 - 752685 | 45365.4 |
| uncharacterized protein duf1049 | EDC56_0658 | Not Available | Negative | 752686 - 752982 | 10673.7 |
| integration host factor subunit beta | EDC56_0659 | Not Available | Negative | 753100 - 753396 | 11159.5 |
| ssu ribosomal protein s1p | EDC56_0660 | Not Available | Negative | 753748 - 755433 | 61702.3 |
| cytidylate kinase | EDC56_0661 | Not Available | Negative | 755647 - 756369 | 25703.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | EDC56_0662 | Not Available | Negative | 756359 - 757702 | 46615.9 |
| prephenate dehydrogenase | EDC56_0663 | Not Available | Negative | 757795 - 758685 | 32278.6 |
| histidinol-phosphate aminotransferase | EDC56_0664 | Not Available | Negative | 758688 - 759791 | 39284.9 |
| chorismate mutase | EDC56_0665 | Not Available | Negative | 759867 - 761012 | 41789.7 |
| phosphoserine aminotransferase | EDC56_0666 | Not Available | Negative | 761121 - 762200 | 39353.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
