Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 742392 - 742468 | Not Available |
| excinuclease abc subunit b | EDC56_0648 | Not Available | Negative | 742596 - 744650 | 77376.4 |
| Trna-asn | Not Available | Not Available | Positive | 744870 - 744944 | Not Available |
| fatty-acyl-coa synthase | EDC56_0650 | Not Available | Negative | 745012 - 746643 | 59466.4 |
| Trna-asn | Not Available | Not Available | Positive | 746886 - 746960 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 747107 - 747181 | Not Available |
| di/tricarboxylate transporter | EDC56_0653 | Not Available | Negative | 747428 - 749197 | 62533.3 |
| hypothetical protein | EDC56_0654 | Not Available | Negative | 749253 - 750212 | 34333.3 |
| competence protein comea | EDC56_0655 | Not Available | Negative | 750318 - 750611 | 10371.7 |
| orotidine-5'-phosphate decarboxylase | EDC56_0656 | Not Available | Negative | 750733 - 751434 | 24554.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
