Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system substrate-binding protein | EDC56_0637 | Not Available | Negative | 733349 - 734959 | 60056.3 |
| uncharacterized protein yxji | EDC56_0638 | Not Available | Negative | 735403 - 735990 | 21981.6 |
| (s)-ureidoglycine aminohydrolase | EDC56_0639 | Not Available | Negative | 736524 - 737363 | 31437.2 |
| dna-binding marr family transcriptional regulator | EDC56_0640 | Not Available | Positive | 737583 - 738128 | 20435.6 |
| cytidine deaminase | EDC56_0641 | Not Available | Negative | 738214 - 738621 | 14882.9 |
| photosystem i subunit 7 | EDC56_0642 | Not Available | Negative | 738850 - 739071 | 7962.59 |
| putative membrane protein | EDC56_0643 | Not Available | Negative | 739087 - 740178 | 38701.7 |
| dna-binding transcriptional lysr family regulator | EDC56_0644 | Not Available | Negative | 740484 - 741344 | 31786.3 |
| hypothetical protein | EDC56_0645 | Not Available | Positive | 741468 - 741830 | 12876.2 |
| pyridoxamine 5'-phosphate oxidase | EDC56_0646 | Not Available | Positive | 741848 - 742342 | 18312.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
