Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vanz like protein | EDC56_0584 | Not Available | Negative | 652061 - 652483 | 16243.3 |
| sugar lactone lactonase yvre | EDC56_0585 | Not Available | Negative | 652518 - 653387 | 31331.4 |
| fkbm family methyltransferase | EDC56_0586 | Not Available | Negative | 653412 - 654227 | 29766.0 |
| acetoacetyl-[acyl-carrier protein] synthase | EDC56_0587 | Not Available | Negative | 654398 - 656260 | 66279.7 |
| arac family transcriptional regulator with amidase-like domain | EDC56_0588 | Not Available | Positive | 656464 - 657468 | 37557.8 |
| indolepyruvate ferredoxin oxidoreductase | EDC56_0589 | Not Available | Positive | 657891 - 661430 | 131230.0 |
| leucine dehydrogenase | EDC56_0590 | Not Available | Positive | 661548 - 662663 | 40246.8 |
| acetyl-coa c-acetyltransferase | EDC56_0591 | Not Available | Positive | 662845 - 664020 | 40454.6 |
| thiamine pyrophosphate-dependent acetolactate synthase large subunit-like protein | EDC56_0592 | Not Available | Negative | 664100 - 665779 | 61310.7 |
| hemolysin type calcium binding protein | EDC56_0593 | Not Available | Negative | 666080 - 670549 | 160688.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
