Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall biosynthesis | EDC56_0574 | Not Available | Negative | 641873 - 643051 | 44650.1 |
| udp-n-acetyl-d-mannosaminuronic acid dehydrogenase | EDC56_0575 | Not Available | Negative | 643123 - 644325 | 44138.1 |
| udp-n-acetylglucosamine 2-epimerase | EDC56_0576 | Not Available | Negative | 644413 - 645549 | 41775.7 |
| yebc/pmpr family dna-binding regulatory protein | EDC56_0577 | Not Available | Negative | 646205 - 646924 | 26442.1 |
| glutaredoxin | EDC56_0578 | Not Available | Positive | 647074 - 647403 | 12312.9 |
| putative yigz family protein | EDC56_0579 | Not Available | Negative | 647426 - 648034 | 21944.3 |
| eama-like transporter family protein | EDC56_0580 | Not Available | Negative | 648080 - 648952 | 31846.2 |
| nitroreductase | EDC56_0581 | Not Available | Negative | 648952 - 649512 | 20186.2 |
| duf2947 family protein | EDC56_0582 | Not Available | Negative | 649713 - 650189 | 19027.2 |
| atpase subunit of abc transporter with duplicated atpase domains | EDC56_0583 | Not Available | Positive | 650378 - 651970 | 59631.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
