Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa ligase (amp-forming) (exosortase a-associated) | EDC56_0564 | Not Available | Negative | 628568 - 630148 | 57899.7 |
| trna a-37 threonylcarbamoyl transferase component bud32 | EDC56_0565 | Not Available | Positive | 630368 - 631801 | 54839.0 |
| ras superfamily gtp-binding protein ylqf | EDC56_0566 | Not Available | Positive | 631888 - 632835 | 35216.9 |
| putative chaperone protein | EDC56_0567 | Not Available | Positive | 632968 - 634347 | 50777.5 |
| n-acetylglucosaminyldiphosphoundecaprenol n-acetyl-beta-d-mannosaminyltransferase | EDC56_0568 | Not Available | Negative | 634372 - 635115 | 27537.6 |
| heparinase ii/iii-like protein | EDC56_0569 | Not Available | Negative | 635112 - 636977 | 70290.6 |
| glycosyltransferase involved in cell wall biosynthesis | EDC56_0570 | Not Available | Negative | 637088 - 638164 | 39871.3 |
| glycosyl hydrolase family 10 | EDC56_0571 | Not Available | Negative | 638201 - 639256 | 40048.0 |
| hypothetical protein | EDC56_0572 | Not Available | Negative | 639256 - 640443 | 45207.8 |
| o-antigen/teichoic acid export membrane protein | EDC56_0573 | Not Available | Negative | 640447 - 641871 | 53057.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
