Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease r | EDC56_0554 | Not Available | Positive | 617527 - 619482 | 73238.0 |
| hypothetical protein | EDC56_0555 | Not Available | Negative | 619530 - 620183 | 24431.3 |
| nte family protein | EDC56_0556 | Not Available | Negative | 620551 - 622800 | 82987.9 |
| pyrroloquinoline-quinone synthase | EDC56_0557 | Not Available | Negative | 622899 - 623651 | 28741.0 |
| pyrroloquinoline quinone biosynthesis protein e | EDC56_0558 | Not Available | Negative | 623670 - 624851 | 44029.4 |
| pyrroloquinoline quinone biosynthesis protein d | EDC56_0559 | Not Available | Negative | 624829 - 625083 | 9648.73 |
| pyrroloquinoline quinone biosynthesis protein b | EDC56_0560 | Not Available | Negative | 625137 - 626051 | 33416.0 |
| uncharacterized protein duf4124 | EDC56_0561 | Not Available | Negative | 626425 - 626901 | 17496.6 |
| phosphopantetheine binding protein | EDC56_0562 | Not Available | Positive | 627047 - 627301 | 9038.67 |
| diaminopimelate decarboxylase | EDC56_0563 | Not Available | Negative | 627334 - 628560 | 43650.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
