Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_0534 | Not Available | Negative | 602258 - 602683 | 15790.7 |
| Trna-ser | Not Available | Not Available | Positive | 602873 - 602960 | Not Available |
| 7-cyano-7-deazaguanine reductase | EDC56_0536 | Not Available | Negative | 603067 - 603897 | 31242.0 |
| abc-2 type transport system permease protein | EDC56_0537 | Not Available | Negative | 603977 - 604750 | 28670.8 |
| abc-2 type transport system atp-binding protein | EDC56_0538 | Not Available | Negative | 604750 - 605682 | 34248.5 |
| Trna-gly | Not Available | Not Available | Positive | 605831 - 605906 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 605909 - 605984 | Not Available |
| peptide-methionine (r)-s-oxide reductase | EDC56_0541 | Not Available | Negative | 606202 - 606600 | 14804.2 |
| alanine-synthesizing transaminase | EDC56_0542 | Not Available | Positive | 606699 - 607997 | 48197.9 |
| hypothetical protein | EDC56_0543 | Not Available | Positive | 608060 - 608521 | 17489.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
