Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ca-activated chloride channel family protein | EDC56_0524 | Not Available | Positive | 588605 - 590701 | 77256.5 |
| oxygen tolerance protein batd | EDC56_0525 | Not Available | Positive | 590717 - 592435 | 62399.1 |
| histidinol phosphate aminotransferase | EDC56_0526 | Not Available | Positive | 592516 - 593574 | 39330.8 |
| hypothetical protein | EDC56_0527 | Not Available | Negative | 593626 - 593910 | 11045.2 |
| hypothetical protein | EDC56_0528 | Not Available | Negative | 594145 - 594450 | 11742.8 |
| merr-like dna binding protein | EDC56_0529 | Not Available | Positive | 594560 - 594880 | 12442.8 |
| hypothetical protein | EDC56_0530 | Not Available | Positive | 595127 - 596155 | 36437.0 |
| cu(i)/ag(i) efflux system membrane protein cusa/sila | EDC56_0531 | Not Available | Negative | 596201 - 599362 | 114696.0 |
| cu(i)/ag(i) efflux system membrane fusion protein | EDC56_0532 | Not Available | Negative | 599355 - 600701 | 49560.9 |
| outer membrane protein tolc | EDC56_0533 | Not Available | Negative | 600777 - 602105 | 49638.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
