Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna m(2)g-2445 methyltransferase | EDC56_0514 | Not Available | Negative | 575660 - 577867 | 82258.4 |
| hypothetical protein | EDC56_0515 | Not Available | Negative | 578052 - 578210 | 5978.34 |
| ribosome modulation factor | EDC56_0516 | Not Available | Positive | 578246 - 578458 | 8054.4 |
| dihydroorotate oxidase a | EDC56_0517 | Not Available | Negative | 578492 - 579514 | 36724.6 |
| glutamate dehydrogenase | EDC56_0518 | Not Available | Negative | 579818 - 584671 | 183525.0 |
| hypothetical protein | EDC56_0519 | Not Available | Positive | 584894 - 585061 | 6264.85 |
| moxr-like atpase | EDC56_0520 | Not Available | Positive | 585112 - 586134 | 37292.5 |
| uncharacterized protein duf58 | EDC56_0521 | Not Available | Positive | 586138 - 587097 | 36785.6 |
| uncharacterized protein duf4381 | EDC56_0522 | Not Available | Positive | 587094 - 587603 | 19321.2 |
| ca-activated chloride channel family protein | EDC56_0523 | Not Available | Positive | 587596 - 588612 | 36697.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
