Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyttr family two component transcriptional regulator | EDC56_0504 | Not Available | Negative | 564984 - 565694 | 26525.3 |
| signal transduction histidine kinase lyts | EDC56_0505 | Not Available | Negative | 565691 - 567391 | 62143.4 |
| Trna-ala | Not Available | Not Available | Positive | 567528 - 567603 | Not Available |
| hypothetical protein | EDC56_0507 | Not Available | Negative | 567707 - 568012 | 11239.7 |
| hemoglobin | EDC56_0508 | Not Available | Negative | 568127 - 568561 | 16455.7 |
| adhesin transport system membrane fusion protein | EDC56_0509 | Not Available | Negative | 568640 - 569986 | 50598.8 |
| atp-binding cassette subfamily c protein lapb | EDC56_0510 | Not Available | Negative | 569967 - 572351 | 88020.8 |
| gmp reductase | EDC56_0511 | Not Available | Negative | 572491 - 573534 | 37424.9 |
| putative salt-induced outer membrane protein | EDC56_0512 | Not Available | Negative | 573814 - 574560 | 28080.1 |
| small conductance mechanosensitive channel | EDC56_0513 | Not Available | Negative | 574687 - 575499 | 28925.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
