Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative protease | EDC56_0463 | Not Available | Positive | 520157 - 521152 | 36570.5 |
| collagenase-like prtc family protease | EDC56_0464 | Not Available | Positive | 521206 - 522051 | 31642.7 |
| hypothetical protein | EDC56_0465 | Not Available | Positive | 522222 - 523154 | 35164.2 |
| thioredoxin-like protein | EDC56_0466 | Not Available | Negative | 523254 - 523913 | 24557.7 |
| putative methionine transporter (nhac family) | EDC56_0467 | Not Available | Negative | 523938 - 525254 | 45208.1 |
| acyl-coa thioester hydrolase | EDC56_0468 | Not Available | Negative | 525413 - 525883 | 17808.4 |
| hypothetical protein | EDC56_0469 | Not Available | Positive | 526211 - 526354 | 5142.38 |
| enoyl-coa hydratase/carnithine racemase | EDC56_0470 | Not Available | Negative | 526449 - 527216 | 27631.2 |
| hypothetical protein | EDC56_0471 | Not Available | Negative | 527274 - 527966 | 25997.2 |
| alpha-methylacyl-coa racemase | EDC56_0472 | Not Available | Negative | 527966 - 529111 | 40436.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
