Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase c | EDC56_0453 | Not Available | Negative | 512109 - 512390 | 10509.9 |
| 5'-deoxynucleotidase | EDC56_0454 | Not Available | Negative | 512500 - 513099 | 22762.2 |
| duf3014 family protein | EDC56_0455 | Not Available | Negative | 513334 - 514143 | 29843.3 |
| dnaj like chaperone protein | EDC56_0456 | Not Available | Negative | 514266 - 515081 | 29497.4 |
| hypothetical protein | EDC56_0457 | Not Available | Positive | 515301 - 515618 | 11748.0 |
| glutathione peroxidase | EDC56_0458 | Not Available | Negative | 515646 - 516188 | 20546.2 |
| 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9, 17-dione monooxygenase | EDC56_0459 | Not Available | Negative | 516290 - 517477 | 42867.1 |
| dna-binding csgd family transcriptional regulator | EDC56_0460 | Not Available | Positive | 517756 - 518940 | 43586.8 |
| chagasin family peptidase inhibitor i42 | EDC56_0461 | Not Available | Negative | 519068 - 519388 | 11717.1 |
| putative lipid carrier protein yhbt | EDC56_0462 | Not Available | Negative | 519483 - 519971 | 17879.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
