Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein ompa-like peptidoglycan-associated protein | EDC56_0443 | Not Available | Negative | 501007 - 501705 | 24421.5 |
| hypothetical protein | EDC56_0444 | Not Available | Negative | 501763 - 502719 | 35797.4 |
| hypothetical protein | EDC56_0445 | Not Available | Negative | 502756 - 504042 | 48702.7 |
| uracil-dna glycosylase | EDC56_0446 | Not Available | Negative | 504130 - 504837 | 26211.2 |
| hypothetical protein | EDC56_0447 | Not Available | Negative | 505052 - 505345 | 11182.4 |
| pimeloyl-acp methyl ester carboxylesterase | EDC56_0448 | Not Available | Positive | 505493 - 506401 | 34239.8 |
| hd-gyp domain-containing protein (c-di-gmp phosphodiesterase class ii) | EDC56_0449 | Not Available | Negative | 506584 - 509523 | 110255.0 |
| superfamily ii dna/rna helicase | EDC56_0450 | Not Available | Negative | 509663 - 511042 | 50436.6 |
| hypothetical protein | EDC56_0451 | Not Available | Positive | 511354 - 511707 | 13628.7 |
| uncharacterized protein duf3301 | EDC56_0452 | Not Available | Negative | 511744 - 512067 | 12962.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
