Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate transporter | EDC56_0433 | Not Available | Positive | 488077 - 488979 | 31938.5 |
| outer membrane receptor protein involved in fe transport | EDC56_0434 | Not Available | Negative | 489046 - 491589 | 93651.9 |
| hypothetical protein | EDC56_0435 | Not Available | Positive | 491863 - 492903 | 37305.6 |
| putative secreted protein | EDC56_0436 | Not Available | Positive | 492896 - 493516 | 21773.9 |
| putative secreted protein | EDC56_0437 | Not Available | Negative | 493757 - 494374 | 20502.0 |
| helix-turn-helix protein | EDC56_0438 | Not Available | Negative | 494557 - 495579 | 37927.5 |
| arac-like dna-binding protein | EDC56_0439 | Not Available | Positive | 495808 - 496884 | 41658.1 |
| hypothetical protein | EDC56_0440 | Not Available | Negative | 496894 - 498567 | 62097.8 |
| succinyldiaminopimelate desuccinylase | EDC56_0441 | Not Available | Positive | 498890 - 500029 | 40904.4 |
| 16s rrna (guanine1516-n2)-methyltransferase | EDC56_0442 | Not Available | Negative | 500038 - 500838 | 28229.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
