Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p) transhydrogenase subunit alpha | EDC56_0424 | Not Available | Positive | 478221 - 479357 | 40639.3 |
| nad(p) transhydrogenase subunit alpha | EDC56_0425 | Not Available | Positive | 479357 - 479635 | 9742.14 |
| nad(p) transhydrogenase subunit beta | EDC56_0426 | Not Available | Positive | 479646 - 481043 | 48525.2 |
| cytochrome c peroxidase | EDC56_0427 | Not Available | Negative | 481177 - 482142 | 34487.9 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 482480 - 482576 | Not Available |
| uncharacterized membrane protein yjjb (duf3815 family) | EDC56_0428 | Not Available | Negative | 482484 - 482960 | 17134.9 |
| uncharacterized membrane protein yjjp (duf1212 family) | EDC56_0429 | Not Available | Negative | 482953 - 483726 | 27513.9 |
| pyruvate formate lyase activating enzyme | EDC56_0430 | Not Available | Negative | 483763 - 484500 | 27944.8 |
| formate c-acetyltransferase | EDC56_0431 | Not Available | Negative | 484602 - 486872 | 84077.5 |
| putative transcriptional regulator yheo | EDC56_0432 | Not Available | Positive | 487281 - 487988 | 26671.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
