Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium chelatase subunit d | EDC56_0414 | Not Available | Negative | 467796 - 469565 | 63815.6 |
| cobalt transporter subunit cbta | EDC56_0415 | Not Available | Negative | 469558 - 470328 | 27046.1 |
| cobalt transporter subunit cbtb | EDC56_0416 | Not Available | Negative | 470452 - 470634 | 6209.36 |
| hypothetical protein | EDC56_0417 | Not Available | Negative | 470914 - 471192 | 10732.8 |
| tetr family transcriptional regulator | EDC56_0418 | Not Available | Negative | 471429 - 472016 | 22468.4 |
| uncharacterized protein duf1282 | EDC56_0419 | Not Available | Negative | 472624 - 473232 | 22107.5 |
| xaa-his dipeptidase | EDC56_0420 | Not Available | Negative | 473531 - 474988 | 51867.1 |
| hypothetical protein | EDC56_0421 | Not Available | Positive | 475233 - 475430 | 7705.21 |
| atp-binding cassette subfamily b protein/atp-binding cassette subfamily b multidrug efflux pump | EDC56_0422 | Not Available | Positive | 475482 - 477302 | 67878.8 |
| Trna-leu | Not Available | Not Available | Positive | 477441 - 477527 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
