Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage shock protein e | EDC56_0384 | Not Available | Negative | 432858 - 433178 | 11527.8 |
| sodium/proton antiporter (cpa1 family) | EDC56_0385 | Not Available | Positive | 433653 - 435491 | 66345.7 |
| two-component system phosphate regulon sensor histidine kinase phor | EDC56_0386 | Not Available | Negative | 435488 - 436723 | 45860.9 |
| winged helix family two component transcriptional regulator | EDC56_0387 | Not Available | Negative | 436875 - 437585 | 26549.9 |
| formyltetrahydrofolate deformylase | EDC56_0388 | Not Available | Negative | 437685 - 438539 | 32511.8 |
| putative radical sam protein ygiq | EDC56_0389 | Not Available | Positive | 438761 - 441193 | 91043.4 |
| diguanylate cyclase (ggdef)-like protein | EDC56_0390 | Not Available | Positive | 441404 - 442579 | 43573.2 |
| trna pseudouridine32 synthase/23s rrna pseudouridine746 synthase | EDC56_0391 | Not Available | Positive | 442628 - 443491 | 32424.9 |
| uncharacterized protein yehs (duf1456 family) | EDC56_0392 | Not Available | Positive | 443765 - 444223 | 17931.6 |
| hypothetical protein | EDC56_0393 | Not Available | Positive | 444244 - 444531 | 10567.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
