Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron complex outermembrane receptor protein | EDC56_0364 | Not Available | Negative | 408558 - 410846 | 82990.0 |
| hypothetical protein | EDC56_0365 | Not Available | Positive | 411118 - 412077 | 36403.5 |
| 3-oxosteroid 1-dehydrogenase | EDC56_0366 | Not Available | Positive | 412229 - 413965 | 63905.0 |
| succinate-semialdehyde dehydrogenase/glutarate-semialdehyde dehydrogenase | EDC56_0367 | Not Available | Negative | 414016 - 415488 | 52534.8 |
| hydroxymethylglutaryl-coa lyase | EDC56_0368 | Not Available | Positive | 415669 - 416598 | 33239.8 |
| sos response regulatory protein oraa/recx | EDC56_0369 | Not Available | Negative | 416620 - 417300 | 26150.7 |
| recombination protein reca | EDC56_0370 | Not Available | Negative | 417300 - 418370 | 37722.6 |
| phosphotransferase family enzyme | EDC56_0371 | Not Available | Negative | 418560 - 419495 | 34731.7 |
| nicotinamide mononucleotide transporter | EDC56_0372 | Not Available | Negative | 419492 - 420097 | 23572.7 |
| signal transduction histidine kinase | EDC56_0373 | Not Available | Positive | 420301 - 422889 | 95973.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
