Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin synthase alpha chain | EDC56_0354 | Not Available | Negative | 396053 - 396688 | 22793.4 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | EDC56_0355 | Not Available | Negative | 396701 - 397474 | 28964.1 |
| glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii) | EDC56_0356 | Not Available | Negative | 397467 - 398117 | 23655.9 |
| atp-binding cassette subfamily b protein | EDC56_0357 | Not Available | Negative | 398283 - 400085 | 66314.6 |
| nte family protein | EDC56_0358 | Not Available | Positive | 400197 - 401354 | 42163.8 |
| uncharacterized protein ydga (duf945 family) | EDC56_0359 | Not Available | Negative | 401429 - 402814 | 50320.7 |
| multidrug efflux pump subunit acrb | EDC56_0360 | Not Available | Negative | 402969 - 406061 | 111944.0 |
| rnd family efflux transporter mfp subunit | EDC56_0361 | Not Available | Negative | 406064 - 407218 | 41592.2 |
| tetr family transcriptional regulator | EDC56_0362 | Not Available | Positive | 407316 - 407921 | 22611.9 |
| hypothetical protein | EDC56_0363 | Not Available | Positive | 408087 - 408485 | 14937.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
