Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative peptide zinc metalloprotease protein | EDC56_0344 | Not Available | Negative | 385658 - 387802 | 80859.8 |
| rnd family efflux transporter mfp subunit | EDC56_0345 | Not Available | Negative | 387799 - 389499 | 63885.9 |
| hypothetical protein | EDC56_0346 | Not Available | Positive | 389740 - 390021 | 10399.1 |
| Trna-glu | Not Available | Not Available | Positive | 390114 - 390189 | Not Available |
| iron complex transport system atp-binding protein | EDC56_0348 | Not Available | Negative | 390315 - 391103 | 28222.5 |
| iron complex transport system permease protein | EDC56_0349 | Not Available | Negative | 391097 - 392110 | 35032.4 |
| iron complex transport system substrate-binding protein | EDC56_0350 | Not Available | Negative | 392116 - 392913 | 29246.3 |
| putative mfs family arabinose efflux permease | EDC56_0351 | Not Available | Negative | 392963 - 394177 | 43764.9 |
| hypothetical protein | EDC56_0352 | Not Available | Positive | 394609 - 394944 | 12452.0 |
| steroid 5-alpha-reductase/3-oxo-5-alpha-steroid 4-dehydrogenase 1 | EDC56_0353 | Not Available | Negative | 395131 - 395916 | 29641.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
