Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef)-like protein | EDC56_0334 | Not Available | Negative | 371241 - 372371 | 41280.4 |
| dtw domain-containing protein yfip | EDC56_0335 | Not Available | Positive | 372580 - 373212 | 23439.5 |
| hypothetical protein | EDC56_0336 | Not Available | Positive | 373434 - 376364 | 109307.0 |
| potassium/proton antiporter (cpa1 family) | EDC56_0337 | Not Available | Positive | 376625 - 377821 | 42795.5 |
| uncharacterized protein | EDC56_0338 | Not Available | Negative | 377818 - 378552 | 27794.6 |
| duf3087 family protein | EDC56_0339 | Not Available | Negative | 378596 - 379132 | 20334.0 |
| diguanylate cyclase (ggdef)-like protein | EDC56_0340 | Not Available | Negative | 379201 - 380724 | 55848.5 |
| hypothetical protein | EDC56_0341 | Not Available | Negative | 380721 - 380825 | 3868.96 |
| vcbs repeat-containing protein | EDC56_0342 | Not Available | Negative | 380797 - 384729 | 140429.0 |
| rnd family efflux transporter mfp subunit | EDC56_0343 | Not Available | Negative | 384840 - 385646 | 29485.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
