Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef)-like protein | EDC56_0314 | Not Available | Negative | 346961 - 349162 | 81333.3 |
| methylenetetrahydrofolate reductase (nadph) | EDC56_0315 | Not Available | Positive | 349375 - 350124 | 28667.3 |
| hypothetical protein | EDC56_0316 | Not Available | Positive | 350196 - 350747 | 20174.4 |
| choline dehydrogenase | EDC56_0317 | Not Available | Positive | 350901 - 352550 | 60291.6 |
| hypothetical protein | EDC56_0318 | Not Available | Positive | 352692 - 353207 | 19906.8 |
| pp_00310 | EDC56_0319 | Not Available | Positive | 353318 - 354358 | Not Available |
| hypothetical protein | EDC56_0320 | Not Available | Negative | 354370 - 354750 | 14053.1 |
| transaldolase | EDC56_0321 | Not Available | Positive | 354929 - 355882 | 35342.9 |
| putative tellurite resistance protein b-like protein | EDC56_0322 | Not Available | Positive | 355875 - 356330 | 17362.6 |
| anti-anti-sigma factor | EDC56_0323 | Not Available | Negative | 356332 - 356823 | 18276.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
