Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine-n- acetylmuramylpentapeptide n-acetylglucosamine transferase | EDC56_3924 | Not Available | Negative | 4382307 - 4383389 | 38175.6 |
| cell division-specific peptidoglycan biosynthesis regulator ftsw | EDC56_3925 | Not Available | Negative | 4383386 - 4384639 | 45999.4 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | EDC56_3926 | Not Available | Negative | 4384639 - 4386000 | 47739.2 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | EDC56_3927 | Not Available | Negative | 4386004 - 4387086 | 39590.5 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | EDC56_3928 | Not Available | Negative | 4387089 - 4388477 | 49153.8 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | EDC56_3929 | Not Available | Negative | 4388474 - 4389976 | 53646.9 |
| cell division protein ftsi (penicillin-binding protein 3) | EDC56_3930 | Not Available | Negative | 4389973 - 4391655 | 61163.9 |
| cell division protein ftsl | EDC56_3931 | Not Available | Negative | 4391691 - 4391999 | 11456.0 |
| 16s rrna (cytosine1402-n4)-methyltransferase | EDC56_3932 | Not Available | Negative | 4392007 - 4392927 | 34237.1 |
| mraz protein | EDC56_3933 | Not Available | Negative | 4392936 - 4393391 | 17196.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
