Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 8-oxo-dgtp diphosphatase | EDC56_3914 | Not Available | Negative | 4369743 - 4370216 | 17115.4 |
| glutamate n-acetyltransferase | EDC56_3915 | Not Available | Negative | 4370216 - 4371433 | 42468.3 |
| protein translocase subunit seca | EDC56_3916 | Not Available | Negative | 4371596 - 4374319 | 102688.0 |
| peptidase m23-like protein | EDC56_3917 | Not Available | Negative | 4374543 - 4375475 | 34061.7 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | EDC56_3918 | Not Available | Negative | 4375589 - 4376503 | 33046.6 |
| cell division protein ftsz | EDC56_3919 | Not Available | Negative | 4376618 - 4377802 | 41204.6 |
| cell division protein ftsa | EDC56_3920 | Not Available | Negative | 4377849 - 4379081 | 44012.0 |
| cell division protein ftsq | EDC56_3921 | Not Available | Negative | 4379126 - 4379929 | 30327.0 |
| d-alanine-d-alanine ligase | EDC56_3922 | Not Available | Negative | 4379955 - 4380887 | 33249.9 |
| udp-n-acetylmuramate--l-alanine ligase | EDC56_3923 | Not Available | Negative | 4380884 - 4382314 | 52050.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
