Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| snoal-like protein | EDC56_3904 | Not Available | Negative | 4359423 - 4359941 | 19602.1 |
| nucleoside-diphosphate-sugar epimerase | EDC56_3905 | Not Available | Negative | 4359968 - 4360903 | 33845.6 |
| pyruvate kinase | EDC56_3906 | Not Available | Positive | 4361255 - 4362685 | 51413.7 |
| hypothetical protein | EDC56_3907 | Not Available | Positive | 4362925 - 4363683 | 27071.0 |
| type iv pilus assembly protein pila | EDC56_3908 | Not Available | Negative | 4364039 - 4364479 | 15088.9 |
| type iv pilus assembly protein pilb | EDC56_3909 | Not Available | Positive | 4364798 - 4366519 | 63740.1 |
| type iv pilus assembly protein pilc | EDC56_3910 | Not Available | Positive | 4366522 - 4367748 | 43706.6 |
| type 4 prepilin peptidase 1 | EDC56_3911 | Not Available | Positive | 4367785 - 4368663 | 32469.2 |
| dephospho-coa kinase | EDC56_3912 | Not Available | Positive | 4368820 - 4369434 | 22569.8 |
| hypothetical protein | EDC56_3913 | Not Available | Positive | 4369459 - 4369677 | 8048.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
