Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoleucyl-trna synthetase | EDC56_3894 | Not Available | Negative | 4345641 - 4348439 | 104435.0 |
| riboflavin kinase/fmn adenylyltransferase | EDC56_3895 | Not Available | Negative | 4348538 - 4349467 | 34575.7 |
| putative peptidoglycan lipid ii flippase | EDC56_3896 | Not Available | Negative | 4349586 - 4351202 | 58213.1 |
| 2'-5' rna ligase | EDC56_3897 | Not Available | Negative | 4351317 - 4351877 | 20681.9 |
| adp-ribose pyrophosphatase | EDC56_3898 | Not Available | Negative | 4351871 - 4352521 | 24059.2 |
| hypothetical protein | EDC56_3899 | Not Available | Positive | 4352639 - 4353622 | 38128.8 |
| exodeoxyribonuclease i subunit c | EDC56_3900 | Not Available | Negative | 4353627 - 4355078 | 54840.7 |
| serine/threonine transporter | EDC56_3901 | Not Available | Negative | 4355291 - 4356472 | 40642.0 |
| homodimeric fumarase (class i) | EDC56_3902 | Not Available | Negative | 4356698 - 4358215 | 54576.9 |
| hypothetical protein | EDC56_3903 | Not Available | Negative | 4358486 - 4359280 | 28777.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
