Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv fimbrial biogenesis protein fimt | EDC56_3884 | Not Available | Positive | 4336523 - 4337086 | 21140.9 |
| type iv pilus assembly protein pily1 | EDC56_3885 | Not Available | Negative | 4337117 - 4340068 | 107771.0 |
| type iv pilus assembly protein pile | EDC56_3886 | Not Available | Negative | 4340107 - 4340535 | 15816.6 |
| tfp pilus assembly protein pilx | EDC56_3887 | Not Available | Negative | 4340546 - 4341139 | 20815.8 |
| type iv pilus assembly protein pilw | EDC56_3888 | Not Available | Negative | 4341142 - 4342242 | 38800.4 |
| type iv pilus assembly protein pilv | EDC56_3889 | Not Available | Negative | 4342242 - 4342724 | 17810.2 |
| type iv fimbrial biogenesis protein fimt | EDC56_3890 | Not Available | Negative | 4342739 - 4343218 | 17430.1 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | EDC56_3891 | Not Available | Negative | 4343470 - 4344459 | 36114.1 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slpa | EDC56_3892 | Not Available | Negative | 4344554 - 4344988 | 15661.8 |
| signal peptidase ii | EDC56_3893 | Not Available | Negative | 4345069 - 4345545 | 17510.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
