Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartyl-trna synthetase | EDC56_3874 | Not Available | Negative | 4325623 - 4327392 | 65860.2 |
| putative fmdb family regulatory protein | EDC56_3875 | Not Available | Negative | 4327477 - 4327704 | 8105.47 |
| nucleoid dna-binding protein | EDC56_3876 | Not Available | Negative | 4327923 - 4328279 | 13017.2 |
| diadenosine tetraphosphate (ap4a) hit family hydrolase | EDC56_3877 | Not Available | Negative | 4328513 - 4328947 | 16085.5 |
| prolyl-trna synthetase | EDC56_3878 | Not Available | Positive | 4329035 - 4330777 | 63904.3 |
| transglycosylase-like protein with slt domain | EDC56_3879 | Not Available | Positive | 4330777 - 4331352 | 21906.6 |
| cyclic nucleotide-binding protein | EDC56_3880 | Not Available | Negative | 4331349 - 4332020 | 24847.3 |
| tonb family protein | EDC56_3881 | Not Available | Positive | 4332266 - 4333375 | 41310.7 |
| sensor protein pils | EDC56_3882 | Not Available | Positive | 4333468 - 4335063 | 59479.4 |
| two-component system response regulator pilr (ntrc family) | EDC56_3883 | Not Available | Positive | 4335069 - 4336439 | 50295.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
